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New Publications by AFSC Authors

50 citations most recently added to the Pubs Database:

  • MUTO, M. M., V. T. HELKER, B. J. DELEAN, N. C. YOUNG, J. C. FREED, R. P. ANGLISS, N. A. FRIDAY, P. L. BOVENG, J. M. BREIWICK, B. M. BROST, M. F. CAMERON, P. J. CLAPHAM, J. L. CRANCE, S. P. DAHLE, M. E. DAHLHEIM, B. S. FADELY, M. C. FERGUSON, L. W. FRITZ, K. T. GOETZ, R. C. HOBBS, Y. V. IVASHCHENKO, A. S. KENNEDY, J. M. LONDON, S. A. MIZROCH, R. R. REAM, E. L. RICHMOND, K. E. W. SHELDEN, K. L. SWEENEY, R. G. TOWELL, P. R. WADE, J. M. WAITE, and A. N. ZERBINI. 2021. Alaska marine mammal stock assessments, 2020. U.S. Dep. Commer., NOAA Tech. Memo. NMFS-AFSC-421, 398 p.  Online.  (added 7-27-21).
     
  • SEWALL, F., B. NORCROSS, and R. HEINTZ. 2021. Growth, condition, and swimming performance of juvenile Pacific herring with winter feeding rations. Can. J Fish. Aquat. Sci. 78. https://doi.org/10.1139/cjfas-2020-0293  Online.  (added 7-21-21).
     
  • McCLINTOCK, B. T., B. ABRAHMS, R. B. CHANDLER, P. B. CONN, S. J. CONVERSE, R. EMMET, B. GARDNER, N. J. HOSTETTER and D. S. JOHNSON. 2021. An integrated path for spatial capture-recapture and animal movement modeling. Ecology. e03473. https://doi.org/10.1002/ecy.3473   Online.  (added 7-21-21).
     
  • AMBURGEY, S. M., A. A. YACKEL ADAMS, B. GARDNER, N. J. HOSTETTER, S. R. SIERS, B. T. McCLINTOCK and S. J. CONVERSE. 2021. Evaluation of camera trap-based abundance estimators for unmarked populations. Ecol Appl. e02410. https://doi.org/10.1002/eap.2410   Online.  (added 7-21-21).
     
  • MADRIGAL, B. C., J. L. CRANCE, C. L. BERCHOK, and A. K. STIMPERT. 2021. Call repertoire and inferred ecotype presence of killer whales (Orcinus orca) recorded in the southeastern Chukchi Sea. J. Acoust. Soc. Am. 150(1): 145-158. https://doi.org/10.1121/10.0005405   Online.  (added 7-21-21).
     
  • BRYAN, D. R., S. F. McDERMOTT, J. K. NIELSEN, D. FRASER, and K. M. RAND. 2021. Seasonal migratory patterns of Pacific cod (Gadus macrocephalus) in the Aleutian Islands. Anim. Biotelemetry 9(1):24. https://doi.org/10.1186/s40317-021-00250-2  Online.  (added 7-12-21).
     
  • HELLER-SHIPLEY, M. A., W. T. STOCKHAUSEN, B. J. DALY, A. E. PUNT, and S. E. GOODMAN. 2021. Should harvest control rules for male-only fisheries include reproductive buffers? A Bering Sea Tanner crab (Chionoecetes bairdi) case study. Fish. Res. 243:106049. https://doi.org/10.1016/j.fishres.2021.106049   Online.  (added 7-1-21).
     
  • GEHRI, R. R., K. GRUENTHAL, AND W. A. LARSON. 2021. It’s complicated: Heterogeneous patterns of genetic structure in five fish species from a fragmented river suggest multiple processes can drive differentiation. Evol. App. 00, 1– 19. https://doi.org/10.1111/eva.1326  Online.  (added 7-1-21).
     
  • S. SPONAUGLE, E. GOLDSTEIN, J. IVORY, K. DOERING, E. D’ALESSANDRO, C. GUIGAND, and R. K. COWEN. 2021. Near-reef zooplankton differs across depths in a subtropical seascape, J. Plankton Res. fbab043. https://doi.org/10.1093/plankt/fbab043  Online.  (added 6-25-21).
     
  • RODGVELLER, C., C. V. LÖHR, and J. A. DIMOND. 2021. The effects of capture and time out of water on sablefish (Anoplopoma fimbria) reflexes, mortality, and health. J. Mar. Sci. Eng. 9(6): 675. https://doi.org/10.3390/jmse9060675  Online.  (added 6-25-21).
     
  • WHITTLE, J. A., C. M. KONDZELA, J. T. WATSON, P. D. BARRY, Hv. T. NGUYEN, E. M. YASUMIISHI, D. NICOLLS, and W. A. LARSON. 2021. Genetic stock composition analysis of chum salmon from the prohibited species catch of the 2018 Bering Sea walleye pollock trawl fishery and Gulf of Alaska groundfish fisheries. U.S. Dep. Commer., NOAA Tech. Memo. NMFS-AFSC-420, 81 p.   Online.  (added 6-23-21).
     
  • WHITTLE, J. A., C. M. KONDZELA, J. T. WATSON, P. D. BARRY, Hv. T. NGUYEN, E. M. YASUMIISHI, D. NICOLLS, and W. A. LARSON. 2021. Genetic stock composition analysis of chum salmon from the prohibited species catch of the 2017 Bering Sea walleye pollock trawl fishery and Gulf of Alaska groundfish fisheries. U.S. Dep. Commer., NOAA Tech. Memo. NMFS-AFSC-419, 73 p.   Online.  (added 6-23-21).
     
  • ORR, J. W. 2021. Three new small snailfishes of the genus Careproctus (Teleostei: Cottiformes: Liparidae) from the Aleutian Islands, Alaska. Ichthy. Herp. 1092:456-466. https://doi.org/10.1643/i2020127   Online.  (added 6-15-21).
     
  • THORSON, J. T., A. J. HERMANN, K. SIWICKE, and M. ZIMMERMANN. 2021. Grand challenge for habitat science: stage-structured responses, nonlocal drivers, and mechanistic associations among habitat variables affecting fishery productivity. ICES J. Mar. Sci. fsaa236. https://doi.org/10.1093/icesjms/fsaa236   Online.  (added 6-15-21).
     
  • SIPLE, M. C., L. E. KOEHN, K. F. JOHNSON, A. E. PUNT, T. M. CANALES, P. CARPI, C. L. DE MOOR, J. A. A. DE OLIVEIRA, J. GAO, N. S. JACOBSEN, M. E. LAM, R. LICANDEO, M. LINDEGREN, S. MA, G. J. ÓSKARSSON, S. SANCHEZ-MAROÑO, S. SMOLIŃSKI, S. SURMA, Y. TIAN, D. TOMMASI, M. GUTIÉRREZ T., V. TRENKEL, S. G. ZADOR, and F. ZIMMERMANN. 2021. Considerations for management strategy evaluation for small pelagic fishes. Fish Fish. 2021; 00: 1– 20 https://onlinelibrary.wiley.com/doi/full/10.1111/faf.12579.  Online.  (added 6-15-21).
     
  • GRÜSS, A., J. L. PIRTLE, J. T. THORSON, M. R. LINDEBERG, A. D. NEFF, S. G. LEWIS and T. E. ESSINGTON. 2021. Modeling nearshore fish habitats using Alaska as a regional case study. Fish. Res. 238:105905. https://doi.org/10.1016/j.fishres.2021.105905   Online.  (added 6-9-21).
     
  • HAN, Q., A. GRÜSS, X. SHAN, X. JIN, and J. T. THORSON. 2021. Understanding patterns of distribution shifts and range expansion/contraction for small yellow croaker (Larimichthys polyactis) in the Yellow Sea. Fish Oceanogr. 30:69– 84. https://doi.org/10.1111/fog.12503  Online.  (added 6-9-21).
     
  • WINSHIP, A. J., J. T. THORSON, M. E. CLARKE, H. M. COLEMAN, B. COSTA, S. E. GEORGIAN, D. GILLETT, A. GRÜSS, M. J. HENDERSON, T. F. HOURIGAN, D. D. HUFF, N. KREIDLER, J. L. PIRTLE, J. V. OLSON, M. POTI, C. N. ROOPER, M. F. SIGLER, S. VIEHMAN and C. E. WHITMIRE. 2020. Good practices for species distribution modeling of deep-sea corals and sponges for resource management: data collection, analysis, validation, and communication. Front. Mar. Sci. https://doi.org/10.3389/fmars.2020.00303  Online.  (added 6-9-21).
     
  • REISINGER, R. R., A. S. FRIEDLAENDER, A. N. ZERBINI, D. M. PALACIOS, V. ANDREWS-GOFF, L. DALLA ROSA, M. KOUBLE, K. FINDLAY, C. GARRIGUE, J. HOW, C. JENNER, M.-N. JENNER, B. MATE, H. C. ROSENBAUM, S. M. SEAKAMELA, and R. CONSTANTINE. 2021. Combining regional habitat selection models for large-scale prediction: Circumpolar habitat selection of southern ocean humpback whales. Remote Sensing 13:2074. https://doi.org/10.3390/rs13112074   Online.  (added 6-9-21).
     
  • NANKEY, P., N. FILIPPI, C. E. KUHN, B. DICKERSON, and H. E. LIWANAG. 2021. Under pressure: Effects of instrumentation methods on fur seal pelt function. Mar. Mamm. Sci. https://doi.org/10.1111/mms.12817  Online.  (added 6-9-21).
     
  • BRAKES, P., E. L. CARROLL, S. R. X. DALL, S. A. KEITH, P. K. McGREGOR, S. L. MESNICK, M. J. NOAD, L. RENDELL, M. M. ROBBINS, C. RUTZ, A. THORNTON, A. WHITEN, M. J. WHITING, L. M. APLIN, S. BEARHOP, P. CIUCCI, V. FISHLOCK, J. K. B. FORD, G. N. di SCIARA, M. P. SIMMONDS, F. SPINA, P. R. WADE, H. WHITEHEAD, J. WILLIAMS, and E. C. GARLAND. 2021. A deepening understanding of animal culture suggests lessons for conservation. Proc. Royal Soc. Biol. Sci. 288:20202718. https://doi.org/10.1098/rspb.2020.2718  Online.  (added 6-9-21).
     
  • VIHTAKARI, M., R. HORDOIR, M. TREBLE, M. D. BRYAN, B. ELVARSSON, A. NOGUEIRA, E. H. HALLFREDSSON, J. S. CHRISTIANSEN and O. T. ALBERT. 2021. Pan-Arctic suitable habitat model for Greenland halibut. ICES J. Mar. Sci. fsab007. https://doi.org/10.1093/icesjms/fsab007  Online.  (added 6-7-21).
     
  • THORSON, J. T., W. CHENG, A. J. HERMANN, J. N. IANELLI, M. A. LITZOW, C. A. O'LEARY and G. G. THOMPSON. 2020. Empirical orthogonal function regression: Linking population biology to spatial varying environmental conditions using climate projections. Glob Change Biol. 26:4638– 4649. https://doi.org/10.1111/gcb.15149  Online.  (added 6-7-21).
     
  • THORSON, J. T., C. J. CUNNINGHAM, E. JORGENSEN, A. HAVRON, P.-J. F. HULSON, C. C. MONNAHAN, and P. von SZALAY. 2021. The surprising sensitivity of index scale to delta-model assumptions: Recommendations for model-based index standardization. Fish. Res. 233:105745. .https://doi.org/10.1016/j.fishres.2020.105745  Online.  (added 6-4-21).
     
  • BLACKWELL, S. B., A. M. THODE, A. S. CONRAD, M. C. FERGUSON, C. L. BERCHOK, K. M. STAFFORD, T. A. MARQUES, and K. H. KIM. 2021. Estimating acoustic cue rates in bowhead whales, Balaena mysticetus, during their fall migration through the Alaskan Beaufort Sea. J. Acoust. Soc. Am. 149(5):3611-3625 https://doi.org/10.1121/10.0005043  Online.  (added 6-4-21).
     
  • GRÜSS, A., J. GAO, J. T. THORSON, C. N. ROOPER, G. THOMPSON, J. L. BOLDT, and R. LAUTH. 2020. Estimating synchronous changes in condition and density in eastern Bering Sea fishes. Mar. Eco. Prog. Ser. 635:169-185. https://doi.org/10.3354/meps13213   Online.  (added 6-4-21).
     
  • YEUNG, C., L. A. COPEMAN, M. E. MATTA, and M.-S. YANG. 2021. Latitudinal variation in the growth and condition of juvenile flatfishes in the Bering Sea. Est. Coast. Shelf Sci. 258:107416. https://doi.org/10.1016/j.ecss.2021.107416  Online.  (added 6-4-21).
     
  • MAUNDER, M. N., J. T. THORSON, H. XU, R. OLIVEROS-RAMOS, S. D. HOYLE, L. TREMBLAY-BOYER, H. H. LEE, M. KAI, S.-K. CHANG, T. KITAKADO, C. M. ALBERTSEN, C. V. MINTE-VERA, C. E. LENNERT-CODY, A. M. AIRES-DA-SILVA, and K. R. PINER. 2020. The need for spatio-temporal modeling to determine catch-per-unit effort based indices of abundance and associated composition data for inclusion in stock assessment models. Fish. Res. 229:105594. https://doi.org/10.1016/j.fishres.2020.105594  Online.  (added 6-4-21).
     
  • GOETHEL, D. R., and S. X. CADRIN. 2021. Revival and recent advancements in the spatial fishery models originally conceived by Sidney Holt and Ray Beverton. ICES J. Mar. Sci. Early Online. https://doi.org/10.1093/icesjms/fsab021  Online.  (added 6-2-21).
     
  • LESCHER, C., N. YOCHUM, B. HARRIS, N. WOLF, and J. GAUVIN. 2021. Selecting species specific vitality metrics to predict red king crab (Paralithodes camtschaticus) discard survival. Fish. Res. 240:105964. https://doi.org/10.1016/j.fishres.2021.105964  Online.  (added 5-27-21).
     
  • WHITEHOUSE, G. A., K. Y. AYDIN, A. B. HOLLOWED, K. K. HOLSMAN, W. CHENG, A. FAIG, A. C. HAYNIE, A. J. HERMANN, K. A. KEARNEY, A. E. PUNT, and T. E. ESSINGTON. 2021. Bottom–up impacts of forecasted climate change on the eastern Bering Sea food web. Front. Mar. Sci. 8(47), https://doi.org/10.3389/fmars.2021.624301   Online.  (added 5-27-21).
     
  • O’LEARY, C. A., S. KOTWICKI, G. R. HOFF, J. T. THORSON, V. V. KULIK, J. N. IANELLI, R. R. LAUTH, D. G. NICHOL, J. CONNER and A. E. PUNT. 2021. Estimating spatiotemporal availability of transboundary fishes to fishery-independent surveys. J. Applied Ecol. https://doi.org/10.1111/1365-2664.13914  Online.  (added 5-25-21).
     
  • MONNAHAN, C. C., J. T. THORSON, S. KOTWICKI, N. LAUFFENBURGER, J. N. IANELLI, and A. E. Punt. 2021. Incorporating vertical distribution in index standardization accounts for spatiotemporal availability to acoustic and bottom trawl gear for semi-pelagic species. ICES J. Mar. Sci..fsab085. https://doi.org/10.1093/icesjms/fsab085  Online.  (added 5-20-21).
     
  • GUTHRIE III, C. M., Hv. T. NGUYEN, K. KARPAN, J. T. WATSON, and W. A. LARSON. 2021. Genetic stock composition analysis of Chinook salmon (Oncorhynchus tshawytscha) bycatch samples from the 2019 Bering Sea trawl pollock trawl trawl fishery. U.S. Dep. Commer., NOAA Tech. Memo. NMFS-AFSC-418, 33 p.   Online.  (added 5-19-21).
     
  • GUTHRIE III, C. M., Hv. T. NGUYEN, K. KARPAN, and W. A. LARSON. 2021. Genetic stock composition analysis of Chinook salmon (Oncorhynchus tshawytscha) bycatch samples from the 2019 Gulf of Alaska trawl fisheries. U.S. Dep. Commer., NOAA Tech. Memo. NMFS-AFSC-417, 35 p.   Online.  (added 5-19-21).
     
  • PINCHUK, A. I., S. D. BATTEN, and W. W. STRASBURGER. 2021. Doliolid (Tunicata, Thaliacea) blooms in the southeastern Gulf of Alaska as a result of the recent marine heat wave of 2014–2016. Front. Mar. Sci. 8:159. https://doi.org/10.3389/fmars.2021.625486   Online.  (added 5-18-21).
     
  • BLAISDELL, J., H. L. THALMANN, W. KLAJBOR, Y. ZHANG, J. A. MILLER, B. J. LAUREL and M. T. KAVANAUGH. 2021. A Dynamic Stress-Scape Framework to Evaluate Potential Effects of Multiple Environmental Stressors on Gulf of Alaska Juvenile Pacific Cod. Front. Mar. Sci. 8(497). https://doi.org/10.3389/fmars.2021.656088   Online.  (added 5-18-21).
     
  • MUNCH, S. B., W. S. LEE, M. WALSH, T. HURST, B. A. WASSERMAN, M. MANGEL, and S. SALINAS. 2021. A latitudinal gradient in thermal transgenerational plasticity and a test of theory. 288(1950): 20210797. https://doi.org/10.1098/rspb.2021.0797  Online.  (added 5-18-21).
     
  • McCLINTOCK, BT. 2021. Worth the effort? A practical examination of random effects in hidden Markov models for animal telemetry data. Methods Ecol. Evol. 00:1– 23. https://doi.org/10.1111/2041‐210X.13619  Online.  (added 5-18-21).
     
  • DUMELLE, M., J. M. VER HOEF, C. FUENTES, and A. GITELMAN. 2021. A linear mixed model formulation for spatio-temporal random processes with computational advances for the separable and product-sum covariances. Spatial Stat. https://doi.org/10.1016/j.spasta.2021.100510   Online.  (added 5-18-21).
     
  • CONN, P. B., V. I. CHERNOOK, E. E. MORELAND, I. S. TRUKHANOVA, E. V. REGEHR, A. N. VASILIEV, R. R. WILSON, S. E. BELIKOV, and P. L. BOVENG. 2021. Aerial survey estimates of polar bears and their tracks in the Chukchi Sea. PLOS ONE 16(5):e0251130. https://doi.org/10.1371/journal.pone.0251130  Online.  (added 5-18-21).
     
  • MCGUIRE, T. L., A. D. STEPHENS, J. R. MCCLUNG, C. GARNER, K. A. BUREK-HUNTINGTON, C. E. C. GOERTZ, K. E. W. SHELDEN, G. O’CORRY-CROWE, G. K. HIMES BOOR, and B. WRIGHT. 2020. Anthropogenic scarring in long-term photo-identification records of Cook Inlet beluga whales, Delphinapterus leucas. Mar. Fish. Rev. 83(3-4). https://spo.nmfs.noaa.gov/content/mfr/anthropogenic-scarring-long-term-photo-identification-records-cook-inlet-beluga-whales  Online.  (added 5-17-21).
     
  • GERRINGER, M. E., A. S. DIAS, A. A. VON HAGEL, J. W. ORR, A. P. SUMMERS and S. FARINA. 2021. Habitat influences skeletal morphology and density in the snailfishes (family Liparidae). Front. Zool. 18(1):16. https://doi.org/10.1186/s12983-021-00399-9  Online.  (added 5-17-21).
     
  • TABOR, R. A., E. K. PERKIN, D. A. BEAUCHAMP, L. L. BRITT, R. HAEHN, J. GREEN, T. ROBINSON, S. STOLNACK, D. W. LANTZ, and Z. J. MOORE. 2021. Artificial lights with different spectra do not alter detrimental attraction of young Chinook salmon and sockeye salmon along lake shorelines. Lake Reserv. Manage.: 1-12. https://doi.org/10.1080/10402381.2021.1906364  Online.  (added 5-14-21).
     
  • CLATTERBUCK, C. A., R. L. LEWISON, R. A. ORBEN, J. T. ACKERMAN, L. G. TORRES, R. M. SURYAN, P. WARZYBOK, J. JAHNCKE, and S. A. SHAFFER. 2021. Foraging in marine habitats increases mercury concentrations in a generalist seabird. Chemosphere 279: 130470. https://doi.org/10.1016/j.chemosphere.2021.130470  Online.  (added 5-14-21).
     
  • VESTFALS, C. D., F. J. MUETER, K. S. HEDSTROM, B. J. LAUREL, C. M. PETRIK, J. T. DUFFY-ANDERSON and S. L. DANIELSON. 2021. Modeling the dispersal of polar cod (Boreogadus saida) and saffron cod (Eleginus gracilis) early life stages in the Pacific Arctic using a biophysical transport model. Prog. Oceanogr.:102571 https://doi.org/10.1016/j.pocean.2021.102571   Online.  (added 5-14-21).
     
  • GABRIELE, C. M., L. F. TAYLOR, K. B. HUNTINGTON, C. L. BUCK, K. E. HUNT, K. A. LEFEBVRE, C. LOCKYER, C. LOWE, J. R. MORAN, A. MURPHY, M. C. ROGERS, S. J. TRUMBLE, and S. RAVERTY. 2021. Humpback whale #441 (Festus): Life, death, necropsy, and research findings. Nat. Resour. Rep. NPS/GLBA/NRR—2021/2250. National Park Service. Fort Collins, Colorado. https://irma.nps.gov/DataStore/Reference/Profile/2285345   Online.  (added 4-30-21).
     
  • MORDY, C. W., L. EISNER, K. KEARNEY, D. KIMMEL, M. W. LOMAS, K. MIER, P. PROCTOR, P. H. RESSLER, P. STABENO, and E. WISEGARVER. 2021. Spatiotemporal variability of the nitrogen deficit on the eastern Bering Sea shelf. Cont. Shelf Res. 104423. https://doi.org/10.1016/j.csr.2021.104423   Online.  (added 4-29-21).
     
  • WILLIAMS, B. C., K. R. CRIDDLE, and G. H. KRUSE. 2021. An agent-based model to optimize transboundary management for the walleye pollock (Gadus chalcogrammus) fishery in the Gulf of Alaska. Nat. Resour. Model. E12305. https://doi.org/10.1111/nrm.12305  Online.  (added 4-29-21).
     
  • McGUIRE, T. L., A. D. STEPHENS, J. R. McCLUNG, C. GARNER, K. A. BUREK-HUNTINGTON, C. E. C. GOERTZ, K. E. W. SHELDEN, G. O’CORRY-CROWE, G. K. HIMES BOOR, and B. WRIGHT. 2020. Anthropogenic scarring in long-term photo-identification records of Cook Inlet beluga whales, Delphinapterus leucas. Mar. Fish. Res. 82(3-4). https://doi.org/10.7755/MFR.82.3-4.3  Online.  (added 4-21-21).
     
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