JFM99 Quarterly Rpt. sidebar
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Kodiak
Laboratory Moves to New Research Facility
(Quarterly Report for Jan-Feb-March 1999)
by
Robert Otto

The Kodiak Fisheries Research Center on Near Island
sits on seven acres overlooking Trident Basin.
National Marine Fisheries Service
(NMFS) personnel from the Alaska Fisheries Science Center (AFSC), the Alaska Regional
Office (ARO), and the Northwest Fisheries Science Center (NWFSC) moved into new
office and laboratory facilities at the Kodiak Fisheries Research Center (KFRC) on Near
Island in Kodiak, Alaska, in October 1998. The $19.4 million-research facility is
owned by the Kodiak Island Borough and leased to NMFS, the National Park Service,
the Alaska Department of Fish and Game (ADF&G), and the University of Alaska.
The Kodiak Fisheries Research Center was conceived as a means of providing much-needed
office and laboratory space for fisheries research in Kodiak within a common location,
thereby facilitating interaction among NMFS, University of Alaska, and ADF&G
scientists along with the participation of visiting scientists for the enhancement of
further research.
At the NMFS level, the Kodiak
Fisheries Research Center houses portions of five programs. The ARO’s Kodiak
Office of the Sustainable Fisheries Division disseminates information concerning
regulations, openings, closures, and the progress of fisheries. The AFSC’s
Kodiak field office of the North Pacific Groundfish Observer Program debriefs observers
upon their return from fishing vessel trips to gather information on the species and size
composition of the catch and to ensure that data were properly collected and recorded. The
AFSC’s National Marine Mammal Laboratory (NMML) will occupy the building seasonally
to conduct specialized biological research on harbor seals and Steller sea lions. The
AFSC’s Resource Assessment and Conservation Engineering Division (RACE) plans to
begin a groundfish program at the Kodiak Laboratory soon. The NWFSC’s Resource
Enhancement and Utilization Technologies (REUT) Laboratory develops and tests improved
methods of processing seafood. The AFSC’s Shellfish Assessment Program conducts and
reports results of surveys designed to establish time series estimates of the distribution
and abundance of crabs and other commercial shellfish resources in Alaska. The program is
the largest component of NMFS research in the building and the largest research program at
the new facility.
Background
Kodiak is home port to an active
fishing fleet with a long history of interest in fishery research. It has served as
a base for marine research carried out by the University of Washington, the U. S. Navy,
and several nations including Japan, Poland, and Russia. With the establishment of salmon
research and management programs in the early 1930s, Kodiak became an important base for
Federal fisheries activities. In 1940, a special act of Congress funded a king
crab exploratory fishing and research program that was instrumental in developing
extremely valuable crab fisheries around Kodiak and in the eastern Bering Sea. Exploratory
fishing and research for shellfish in the Gulf of Alaska provided part of the basis for
establishing large shrimp fisheries as well as scallop fisheries. The North Pacific
Shellfish Assessment Program moved to Kodiak in 1971 along with portions of the Juneau
Exploratory Fishing and Gear Research Program and the Ketchikan Fish Products Technology
Laboratory. The AFSC’s Shellfish Assessment Program and the NWFSC’s Utlization
Research Laboratory were housed in the U.S. Coast Guard Support Center in the early 1970s
and the NMFS Enforcement Program in the Gibson Cove facility. With the passage of the
Fisheries Management and Conservation Act in 1976, the development of enormous groundfish
fisheries in the Gulf of Alaska and Bering Sea made a NMFS research facility in
Kodiak a strategic necessity.

The Shellfish Assessment Program was housed in the
U.S. Coast Guard's Kodiak Support Center from the early 1970s until October 1998.
The value of fishery products landed
annually in Kodiak has ranked Kodiak as one of the nation’s top three ports in each
of the past 10 years. By consequence, development of adequate research facilities
was seen as a means to foster needed biological research on species that provide much of
U.S. landings. Support from the Kodiak community for developing continued fisheries
research at both the state and Federal level has been strong. The City of Kodiak donated
7.1 acres of land on Near Island in 1986 for the construction of the University of
Alaska’s Fishery Industrial Technology Center (FITC) and reserved an additional 17
acres for further development of fisheries research facilities on an expanded
campus. The Kodiak Island Borough managed the financing and construction for the
Kodiak Fisheries Research Center on approximately 7 of these 17 acres. Groundbreaking
ceremonies, graciously sponsored by Kodiak native corporations, took place in June 1996.
The Aleutiiq Museum provided anthropological consulting for the proper investigation and
removal of artifacts from a small prehistoric site.
Buildings and Laboratories
The KFRC was designed to provide a
multi-agency marine research facility that would foster marine fishery research as well as
serve as a resource for providing educational opportunities to the Kodiak community as a
whole. The facility consists of three buildings: a pump house, housing for visiting
researchers and students, and the main building, which includes offices, laboratories and
special purpose areas. Located on Near Island within the City of Kodiak on a tract of land
between Trident Way and Trident Basin, the KFRC is connected to the City of Kodiak
by a single arch bridge. All buildings were designed by ECI/Hyer - NBBJ Associated
Architects in concert with five additional specialized firms. Design criteria
included consideration of blending with the natural landscape, optimizing views, and a
southern exposure to maximize use of scarce daylight in winter. The building was
also designed to fit in with the general architecture of the community and the adjacent
FITC. The site is hilly and covered with a mixture of spruce forest and meadows of
salmon berry, grass, ferns, and wildflowers. The site descends from a maximum of 196 feet
to sea level on Trident Basin. Footings for the first floor of the main building are
at 85 feet. The main building, 70-stall parking lot, and visiting scientist’s
quarters are all between the 80 and 100 ft contours. The site, along with the islands on
the seaward side of Trident Basin, provides protection from tsunamis that can accompany
earthquakes in the region.
The Main Building
The main building of the KFRC
contains offices, laboratories and support areas. The building is designed so that
laboratory and display areas that are fed by running seawater or involve moving large
samples (sea lions, bears, totes of fish) are located on the first floor.
Areas for offices, general laboratory work, computer operations, conferences, and
the W. F. Thompson Memorial Library are located on the second floor. The W. F.
Thompson Memorial Library (1,800 sq ft) maintains about 16,000 volumes of fishery
journals, books and other publications. This is the only technical fishery library
in western Alaska and serves scientists from NMFS, the University of Alaska, and the
ADF&G as well as the Kodiak Island Borough school system and the
general public.

A large, oval aquarium is used for display, education,
and research.
The main building of the new Kodiak
facility is equipped with an emergency generator, so that long-term experiments are not
disrupted by a failure of the seawater system during power outages. The building’s
braced steel frame is designed to withstand an earthquake of approximately magnitude 8.
The building contains an ample foyer and conference room area, numerous educational
displays, a large, oval, freestanding aquarium, and a touch tank so that students
may handle intertidal organisms representing the major marine invertebrate phyla. The
building also houses an extensive museum collection containing the most common species of
crabs, shrimps, marine snails, bivalves, and a variety of fishes.
Table 1.
Allocation of space among tenants (net square feet) in the Kodiak Fishery
Research Center based on architectural design
(ECI Hyer/NBBJ)
|
|
Net |
Allocated |
Occupancy |
Group |
Sq Ft |
% |
Common |
Total |
% |
Alaska Department of Fish and Game |
1,010 |
4.1 |
527 |
1,537.1 |
6.2 |
National Park Service |
783 |
3.1 |
409 |
1,191.7 |
4.8 |
University of Alaska |
1,518 |
6.1 |
792 |
2,310.3 |
9.3 |
National Marine Fisheries Service |
13,065 |
52.4 |
6,819 |
19,883.9 |
79.8 |
Common use areas |
8,547 |
34.3 |
|
|
|
Total |
24,923 |
100.0 |
8,547 |
24,923 |
100.0 |
NMFS occupies the largest space in the building and accounts for 80% of building usage
(Table 1 above). Within NMFS, the RACE Shellfish Assessment Program is the
largest user (Table 2 below) and occupies 33 % of the buildings net area.
Table
2. Allocation of space dedicated to the National Marine Fisheries within the Kodiak
Fisheries Research Center.
|
National Marine
Fisheries Group |
Net
Sq Ft |
Building
% |
Resource
Assessment and Conservation Engineering |
8,149 |
32.7 |
Resource Ecology and
Fishery Management, Observer Program |
1,248 |
5.0 |
Utilization
Research Laboratory |
2,269 |
9.1 |
National Marine Mammal
Laboratory |
1,279 |
5.1 |
Alaska
Regional Office, Sustainable Fisheries |
120 |
0.5 |
NMFS Totals |
13,065 |
52.4 |
The Shellfish Assessment Program conducts and reports results of surveys designed
to establish time series estimates of the distribution and abundance of king, snow,
Tanner, and hair crabs in the eastern Bering Sea (EBS); investigates biological
processes and interactions with the environment to estimate growth, mortality, and
recruitment of crabs to improve the precision and accuracy of forecasting stock dynamics;
and identifies and tracks potential pathogens in the dominant shellfish stocks.
Results of surveys and special purpose research are documented and
disseminated in status of stock reports, reports to industry, and formal scientific
publications. Data are managed and archived in a scientific database accessible by
NMFS and NOAA scientists, other researchers, and the public. Program information is
frequently used by the fishing industry to plan their operations.
The Shellfish Assessment Program has
19 offices (2,170 sq ft) that include 21 work stations and comprise 27% of the
program’s area. Laboratory and field storage areas are 16 % of the program’s
area, followed by laboratories (12 %) and diving facilities (10%).
The diving area contains a filling station that includes a compressed
air and cascade system as well as a nitrox system, in addition to areas for the wash
down and repair and storage of gear. The remainder of the Shellfish Program area is taken
by the museum-collections room, general office support and computer support areas, and the
W. F. Thompson Library.
Table 3. Laboratories within the Kodiak Fishery Research
Center. |
Group |
Description |
Net Sq Ft |
% |
ADF&G |
|
1,010 |
11.6 |
|
Chemistry & Ageing Laboratory |
690 |
7.9 |
|
Necropsy Laboratory |
320 |
3.7 |
UAK |
|
1,203 |
13.8 |
|
Instructional
Laboratory |
1,003 |
11.5 |
|
Electron
Microscope |
200 |
2.3 |
NMFS |
|
3,058 |
35.1 |
|
Utilization Research |
1,559 |
17.9 |
|
Shellfish Laboratory |
675 |
7.7 |
|
Video Analysis Laboratory |
310 |
3.6 |
|
NMML Necropsy Room |
514 |
5.9 |
Common |
|
3,440 |
39.5 |
|
General
Seawater Laboratory |
2,485 |
28.5 |
|
Cold
rooms |
450 |
5.2 |
|
Seawater
control room |
255 |
2.9 |
|
Food
Preparation Laboratory |
150 |
1.7 |
|
Water
Quality Laboratory |
100 |
1.1 |
Totals |
|
8,711 |
100.0 |
Laboratories make up 33% of the net square footage in the facility’s main building
(Table 3 above). Two well ventilated necropsy rooms are immediately adjacent to a loading
dock for handling large animals and bulk samples of fish. Necropsy rooms are equipped with
stainless steel tables and protected electrical outlets that allow for total wash down.
They are also located next to a large walk-in freezer for specimen storage.
There is an electron microscope laboratory, a large instructional laboratory,
as well as general laboratory space for utilization research, water chemistry, shellfish
research, and aging fish . The shellfish laboratory includes a small isolated
area for microscopy. A video analysis laboratory contains equipment for
computer-mediated editing and quantification of images, an increasingly more important
part of our underwater and at-sea data gathering efforts. Extensive use of video cameras
are planned for monitoring experiments in the seawater laboratory as well.
The Seawater Laboratory Complex
The seawater laboratory complex is
one of the most desirable features of the new Kodiak facility. The complex consists
of a seawater system, large open laboratory, three cold rooms, a water quality
laboratory, and a food preparation laboratory. The complex is immediately adjacent
to the shellfish laboratory and microscope room in order to facilitate examination
of cultured or experimental animals. The shellfish laboratory, the UAF instructional
laboratory, and the downstairs display area are fed from the complex’s seawater
system as well.
The seawater system starts with
intakes and pumps described below. From the pump house, raw seawater is pumped to
the top of an obelisk-like tower at the northeast end of the building. This tower is
the highest point in the building and gravity flow distributes seawater within the
building as necessary. Some of the water passes through sand filters and some is
left unfiltered. Filtered seawater is frequently desirable for experimental purposes and
in areas such as aquariums where control of species composition and avoidance of fouling
organisms is essential. Unfiltered seawater is used where more natural systems are to be
duplicated and where it is desired to maintain filter feeders such as clams or tunicates.
All laboratories are supplied with one filtered and two unfiltered seawater lines. Each
unfiltered line is used for 2 weeks and then allowed to become anoxic before being
back-flushed with fresh water and reconditioned with saltwater. This procedure is
meant to control fouling on the inside of the lines. Outflow is either through floor
drains or piped through an ozone contact system for disinfection. The ozone system
is critical for research involving known, potentially epizootic pathogens that may be
implicated in king, Tanner, and snow crab population dynamics. All portions of the
seawater laboratory and the cold rooms are also served by freshwater for wash down and low
pressure air for oxygenation.
The general seawater laboratory and
the three associated cold rooms are designed to conduct experiments in a controlled
environment that are easily cross-correlated or verified through observations and
experiments conducted in adjacent bays or ocean areas. The three cold rooms
(each 150 sq ft) are intended to provide strict temperature control for at least three
levels in experiments conducted in small to medium-sized containers. They also offer
obvious advantages relative tocontrolled photoperiod or other variables where strict
isolation is desirable. The general seawater laboratory is intended for much
larger experiments where control is not as critical or where experiment-specific devices
are constructed to provide environmental controls. The laboratory has an open design
allowing for many tanks or experimental units to operate. The seawater laboratory opens to
the gear loft and then to the exterior through large garage type doors and the entire area
is fork lift compatible. This feature allows even large tanks to be manipulated and is
especially intended to allow experimental animals to be transported from shipboard to the
laboratory in large containers. The intent is to minimizes stress caused by handling of
unanesthetized wild animals. Currently we are beginning experiments on the reproductive
biology of Tanner crabs in the seawater laboratory. The experiments are designed to
augment underwater observations that have been carried out by divers, using ROVs (remote
operated vehicles), sled-mounted cameras, or submarines.
The Pump House
The pump house at the new Kodiak
research facility is located on Trident Basin and is fed by two siphon intake lines that
draw water from screened intakes located at 15-and 25-m depths on the bottom of Trident
Basin. Four 40-hp pumps can provide a maximum flow of nearly 1,200 gallons per minute
(gpm), but normal operations call for one or two pumps at 300 to 600 gpm with remaining
pumps in reserve. Reserve pumps can also be used to reverse flow through an intake line in
order to “chase the pig,” a process to clean the lines. (The pig is later
retrieved by divers.) All of the water-contact pump parts are Teflon or Teflon-coated, and
all water lines are PVC plastic. The pumps overcome a static head of about 180 ft to the
top of a tower at one end of the main building. The tower contains sand filters and the
major lines for the seawater distribution system. The seawater return line also passes
through the pump house and carries water from two sources to a subtidal outfall. Most
water will return from tanks and aquaria that contain relatively low densities of native
animals from Kodiak and hence will not need treatment. Water from tanks containing
diseased or exotic organisms will be passed through an ozone contact system before being
returned to the sea. The latter procedure prevents introduction of organisms or pathogens
to Trident Basin or surrounding waters. The ozone generator is capable of
decontaminating up to 500 gpm of contaminated effluent.
Visitor Housing
Housing for visiting scientists
consists of a building along the entry driveway that contains two 2-bedroom and four
single-bedroom apartments. Housing is operated by the University of Alaska but is
available to those visiting and working with the NMFS on a space-available basis.
Summary
The KFRC consolidates NMFS research
and management programs in Kodiak and makes them more accessible to the fishing industry
and the public. The KFRC was made possible through the community’s
long history of interest in fishery research. Information dissemination and
ready access to an adequate technical library are important educational assets. The
new building has alleviated long-standing deficiencies in previous facilities which
lacked a seawater system and adequate laboratory space, both essential for
biological research. Research is intended to improve knowledge of fishery resources
leading to better forecasts of abundance, evaluation of environmental concerns, and the
potential for resource development. Improved knowledge of early life history is a
particular focus of the seawater laboratory and will serve both to improve stock
assessment and evaluate the potential for aquaculture or stock enhancement. The new Kodiak
facility also meets needs for a base of operations for field research, expanding
management and observer coordination in groundfish fisheries and timely cooperation with
the ADF&G on shellfish surveys and fishery management decision-making.
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